The nature of the transition between the Zagros intra-continental collision and the Makran oceanic subduction is a matter of debate: either a major fault cutting the whole lithosphere or a more progressive transition associated with a shallow gently dipping fault restricted to the crust. Microearthquake seismicity located around the transition between the transition zone is restricted to the west of the Jaz-Murian depression and the Jiroft fault. No shallow micro-earthquakes seem to be related to the NNW–SSE trending Zendan–Minab–Palami active fault system. Most of the shallow seismicity is related either to the Zagros mountain belt, located in the west, or to the NS trending Sabzevaran–Jiroft fault system, located in the north. The depth of microearthquakes increases northeastwards to an unusually deep value (for the Zagros) of 40 km. Two dominant types of focal mechanisms are observed in this region: low-angle thrust faulting, mostly restricted to the lower crust, and strike-slip at shallow depths, both consistent with NS shortening. The 3-D inversion of P traveltimes suggests a high-velocity body dipping northeastwards to a depth of 25 km. This high-velocity body, probably related to the lower crust, is associated with the deepest earthquakes showing reverse faulting. We propose that the transition between the Zagros collision and the Makran subduction is not a sharp lithospheric-scale transform fault associated with the Zendan–Minab–Palami fault system. Instead it is a progressive transition located in the lower crust. The oblique collision results in partial partitioning between strike-slip and shortening components within the shallow brittle crust because of the weakness of the pre-existing Zendan–Minab–Palami faults.