Extensive micro-porosity can be found in numerous examples of quartz-rich mylonites deformed in crustal shear zones, but whether or not deformation is involved in the production of such pores remains a matter of active debate. The occurrence of syn-kinematic micro-scale porosity could result in overall changes in rock strength, as well as potentially generating a deep permeability. This would have major implications for fluid-rock interactions, earthquake nucleation and ore deposits. In this study, we focus on micro-pores occurring in quartz-rich shear bands from mylonitic granitoids which outcrop in Ikaria (Cyclades, Greece). Related to the back-arc geodynamics of the Aegean domain during the Miocene, this granitic body intruded the Cycladic basement during active detachment faulting, which has led to heterogeneous deformation of the pluton. While the granite exhibits large-scale levels of strain, increasing with proximity to the detachment fault, quartz-rich shear bands develop as a result of viscous strain localisation, giving rise to S-C structures. Micro- (to nano-) pores occur in pure quartz aggregates of these shear bands, where micro-structural features indicate dominant crystal plasticity, mostly recovering by subgrain rotation.Based on five samples collected at different distances from the detachment fault, we performed microprobe-based hyperspectral cathodoluminescence and electron backscatter diffraction (EBSD) to characterise the micro-pores in pure quartz aggregates. In cathodoluminescence maps, parent and recrystallized quartz grains produce blue (420 nm wavelength) and yellow (650 nm wavelength) signals respectively. Furthermore, both parent and recrystallised grains exhibit a distinct increase in luminescence at 650 nm, which appear visually as very bright yellow rims/halos at their grain boundaries and, to a minor extent, at their subgrain boundaries. Using high-resolution and standard EBSD, we highlight high (to very high) geometrically necessary dislocation densities that partly coincide with such rims/halos, particularly where micro-pores are described. Most of the dislocations that may contribute to these high densities are related to the main dislocation slip system of quartz (prism ), as deduced from from lattice preferred orientation and subgrain analyses. Our findings, therefore, suggest that highly luminescent "yellow" boundaries of quartz grains result from dislocation accumulation, and hence, from crystal plasticity, which can be linked to the production of micro-porosity in these rocks.